IL_6LQU_077

3D structure

PDB id

6LQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 90S small subunit preribosomes in transition states (State A1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGAUUGA*UUUAGAG

Length

14 nucleotides

Bulged bases

6LQU|1|SA|U|1657

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LQU|1|SA|C|1653
6LQU|1|SA|G|1654
6LQU|1|SA|A|1655
6LQU|1|SA|U|1656
6LQU|1|SA|U|1657
6LQU|1|SA|G|1658
6LQU|1|SA|A|1659
*
6LQU|1|SA|U|1741
6LQU|1|SA|U|1742
6LQU|1|SA|U|1743
6LQU|1|SA|A|1744
6LQU|1|SA|G|1745
6LQU|1|SA|A|1746
6LQU|1|SA|G|1747

Current chains

Chain SA

18S pre-rRNA

Nearby chains

Chain B2

U3 small nucleolar RNA-associated protein 12