IL_6LQU_078

3D structure

PDB id

6LQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 90S small subunit preribosomes in transition states (State A1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AAUGGC*GUCAU

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LQU|1|SA|A|1659
6LQU|1|SA|A|1660
6LQU|1|SA|U|1661
6LQU|1|SA|G|1662
6LQU|1|SA|G|1663
6LQU|1|SA|C|1664
*
6LQU|1|SA|G|1737
6LQU|1|SA|U|1738
6LQU|1|SA|C|1739
6LQU|1|SA|A|1740
6LQU|1|SA|U|1741

Current chains

Chain SA

18S pre-rRNA

Nearby chains

Chain B2

U3 small nucleolar RNA-associated protein 12

Chain B3

U3 small nucleolar RNA-associated protein 13