IL_6LQU_090

3D structure

PDB id

6LQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 90S small subunit preribosomes in transition states (State A1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UAGCC*GUGA

Length

9 nucleotides

Bulged bases

6LQU|1|5A|G|354

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LQU|1|5A|U|352
6LQU|1|5A|A|353
6LQU|1|5A|G|354
6LQU|1|5A|C|355
6LQU|1|5A|C|356
*
6LQU|1|5A|G|369
6LQU|1|5A|U|370
6LQU|1|5A|G|371
6LQU|1|5A|A|372

Current chains

Chain 5A

5' ETS

Nearby chains

Chain 5C

U3 small nucleolar RNA-associated protein 7