IL_6LQU_095

3D structure

PDB id

6LQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 90S small subunit preribosomes in transition states (State A1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CUCAGGAU*AGAAUUUG

Length

16 nucleotides

Bulged bases

6LQU|1|SA|U|1724

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LQU|1|SA|C|1675
6LQU|1|SA|U|1676
6LQU|1|SA|C|1677
6LQU|1|SA|A|1678
6LQU|1|SA|G|1679
6LQU|1|SA|G|1680
6LQU|1|SA|A|1681
6LQU|1|SA|U|1682
*
6LQU|1|SA|A|1719
6LQU|1|SA|G|1720
6LQU|1|SA|A|1721
6LQU|1|SA|A|1722
6LQU|1|SA|U|1723
6LQU|1|SA|U|1724
6LQU|1|SA|U|1725
6LQU|1|SA|G|1726

Current chains

Chain SA

18S pre-rRNA

Nearby chains

Chain B3

U3 small nucleolar RNA-associated protein 13