IL_6LSR_034

3D structure

PDB id

6LSR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a pre-60S ribosomal subunit - state B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

GAAGGUGGCU*AGUGUUACAGC

Length

21 nucleotides

Bulged bases

6LSR|1|2|G|748, 6LSR|1|2|C|916

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LSR|1|2|G|745
6LSR|1|2|A|746
6LSR|1|2|A|747
6LSR|1|2|G|748
6LSR|1|2|G|749
6LSR|1|2|U|750
6LSR|1|2|G|751
6LSR|1|2|G|752
6LSR|1|2|C|753
6LSR|1|2|U|754
*
6LSR|1|2|A|909
6LSR|1|2|G|910
6LSR|1|2|U|911
6LSR|1|2|G|912
6LSR|1|2|U|913
6LSR|1|2|U|914
6LSR|1|2|A|915
6LSR|1|2|C|916
6LSR|1|2|A|917
6LSR|1|2|G|918
6LSR|1|2|C|919

Current chains

Chain 2

28S rRNA

Nearby chains

Chain S

60S ribosomal protein L14

Chain b

60S ribosomal protein L18a