IL_6LSR_147

3D structure

PDB id

6LSR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a pre-60S ribosomal subunit - state B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

GGAAACG*CUCGCC

Length

13 nucleotides

Bulged bases

6LSR|1|2|C|4895

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LSR|1|2|G|4890
6LSR|1|2|G|4891
6LSR|1|2|A|4892
6LSR|1|2|A|4893
6LSR|1|2|A|4894
6LSR|1|2|C|4895
6LSR|1|2|G|4896
*
6LSR|1|2|C|4924
6LSR|1|2|U|4925
6LSR|1|2|C|4926
6LSR|1|2|G|4927
6LSR|1|2|C|4928
6LSR|1|2|C|4929

Current chains

Chain 2

28S rRNA

Nearby chains

Chain S

60S ribosomal protein L14

Chain V

60S ribosomal protein L13a

Chain v

60S ribosomal protein L6