IL_6LU8_011
3D structure
- PDB id
- 6LU8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a human pre-60S ribosomal subunit - state A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- UCGUGG*CG
- Length
- 8 nucleotides
- Bulged bases
- 6LU8|1|2|G|188
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6LU8_011 not in the Motif Atlas
- Geometric match to IL_1R3E_001
- Geometric discrepancy: 0.1957
- The information below is about IL_1R3E_001
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_05670.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 9
Unit IDs
6LU8|1|2|U|184
6LU8|1|2|C|185
6LU8|1|2|G|186
6LU8|1|2|U|187
6LU8|1|2|G|188
6LU8|1|2|G|189
*
6LU8|1|2|C|252
6LU8|1|2|G|253
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain H
- 60S ribosomal protein L35
- Chain M
- 60S ribosomal protein L37
- Chain Q
- 60S ribosomal protein L13
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