IL_6LU8_082
3D structure
- PDB id
- 6LU8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a human pre-60S ribosomal subunit - state A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- UGAAC*GAA
- Length
- 8 nucleotides
- Bulged bases
- 6LU8|1|2|A|2428
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6LU8_082 not in the Motif Atlas
- Geometric match to IL_6CZR_410
- Geometric discrepancy: 0.3733
- The information below is about IL_6CZR_410
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_47078.2
- Basepair signature
- cWW-cWS-L-cWW-L
- Number of instances in this motif group
- 6
Unit IDs
6LU8|1|2|U|2415
6LU8|1|2|G|2416
6LU8|1|2|A|2417
6LU8|1|2|A|2418
6LU8|1|2|C|2419
*
6LU8|1|2|G|2427
6LU8|1|2|A|2428
6LU8|1|2|A|2429
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain 4
- Nucleolar GTP-binding protein 1
- Chain P
- 60S ribosomal protein L39
- Chain Y
- 60S ribosomal protein L17
- Chain a
- 60S ribosomal protein L19
Coloring options: