#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5break 6 71-31-74-75-6
1 IL_5J7L_0435J7L0.57430Minor groove platformAA SSU rRNAG993A994C995A996U997*A1044C1045cWWcWScWW
2 IL_4LFB_0394LFB0.59430Minor groove platformA SSU rRNAG993A994C995A996U997*A1044C1045cWWcWScWW
3 IL_6CZR_1516CZR0.50950Minor groove platform1a SSU rRNAG971A972C973A974U975*A1027C1028cWWncWScWW
4 IL_5J7L_0415J7L0.00001Minor groove platformAA SSU rRNAU1380U1381C1382C1383C1384*G933A935ncSHcWWcWScWW
5 IL_4LFB_0374LFB0.05421Minor groove platformA SSU rRNAU1380U1381C1382C1383C1384*G933A935cWWcWScWW
6 IL_6CZR_4106CZR0.201011a SSU rRNAU1363U1364C1365C1366C1367*G911A913ncWWncWScWW

3D structures

Complete motif including flanking bases
SequenceCounts
GACAU*AC3
UUCCC*GCA3
Non-Watson-Crick part of the motif
SequenceCounts
ACA*3
UCC*C3

Release history

Release3.883.89
Date2024-09-112024-10-09
StatusUpdated, 1 parentExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Minor groove platform (5)
  • (1)
  • Basepair signature
    cWW-cWS-L-cWW-L
    Heat map statistics
    Min 0.05 | Avg 0.35 | Max 0.63
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