IL_6M62_017
3D structure
- PDB id
- 6M62 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-Em structure of eukaryotic pre-60S ribosome subunit from Saccharomyces cerevisiae rpf2 delta 255-344 strain, C4 state.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CAGACAGG*CAUAAUG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6M62|1|1|C|435
6M62|1|1|A|436
6M62|1|1|G|437
6M62|1|1|A|438
6M62|1|1|C|439
6M62|1|1|A|440
6M62|1|1|G|494
6M62|1|1|G|495
*
6M62|1|1|C|618
6M62|1|1|A|619
6M62|1|1|U|620
6M62|1|1|A|621
6M62|1|1|A|622
6M62|1|1|U|623
6M62|1|1|G|624
Current chains
- Chain 1
- RDN25-1 rRNA
Nearby chains
- Chain E
- 60S ribosomal protein L6-A
- Chain P
- 60S ribosomal protein L17-A
- Chain e
- 60S ribosomal protein L32
- Chain f
- 60S ribosomal protein L33-A
Coloring options: