IL_6MTB_299
3D structure
- PDB id
- 6MTB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGAUAAC*GCUAAUA(OMC)
- Length
- 15 nucleotides
- Bulged bases
- 6MTB|1|9|U|172
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6MTB_299 not in the Motif Atlas
- Homologous match to IL_8C3A_402
- Geometric discrepancy: 0.0936
- The information below is about IL_8C3A_402
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.4
- Basepair signature
- cWW-L-R-tWH-tWH-tHW-L-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
6MTB|1|9|G|145
6MTB|1|9|G|146
6MTB|1|9|A|147
6MTB|1|9|U|148
6MTB|1|9|A|149
6MTB|1|9|A|150
6MTB|1|9|C|151
*
6MTB|1|9|G|167
6MTB|1|9|C|168
6MTB|1|9|U|169
6MTB|1|9|A|170
6MTB|1|9|A|171
6MTB|1|9|U|172
6MTB|1|9|A|173
6MTB|1|9|OMC|174
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain GG
- 40S ribosomal protein S6
- Chain W
- 60S ribosomal protein L24
- Chain YY
- 40S ribosomal protein S24
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