IL_6MTC_074

3D structure

PDB id

6MTC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UUAA(P7G)G*CCCAUA

Length

12 nucleotides

Bulged bases

6MTC|1|5|U|2070

QA status

Modified nucleotides: P7G

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTC|1|5|U|1905
6MTC|1|5|U|1906
6MTC|1|5|A|1907
6MTC|1|5|A|1908
6MTC|1|5|P7G|1909
6MTC|1|5|G|1910
*
6MTC|1|5|C|2066
6MTC|1|5|C|2067
6MTC|1|5|C|2068
6MTC|1|5|A|2069
6MTC|1|5|U|2070
6MTC|1|5|A|2071

Current chains

Chain 5

28S rRNA

Nearby chains

Chain 7

5S ribosomal RNA; 5S rRNA

Chain F

60S ribosomal protein L7

Chain Q

60S ribosomal protein L18

Chain e

60S ribosomal protein L32

Chain f

60S ribosomal protein L35a