IL_6MTC_257
3D structure
- PDB id
- 6MTC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CCG*CAAG
- Length
- 7 nucleotides
- Bulged bases
- 6MTC|1|9|C|1701, 6MTC|1|9|A|1835
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6MTC_257 not in the Motif Atlas
- Homologous match to IL_4V88_463
- Geometric discrepancy: 0.2039
- The information below is about IL_4V88_463
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61438.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
6MTC|1|9|C|1700
6MTC|1|9|C|1701
6MTC|1|9|G|1702
*
6MTC|1|9|C|1833
6MTC|1|9|A|1834
6MTC|1|9|A|1835
6MTC|1|9|G|1836
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain CC
- 40S ribosomal protein S2
- Chain OO
- 40S ribosomal protein S14
- Chain aa
- 40S ribosomal protein S26
- Chain v
- Interferon-related developmental regulator 2
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