IL_6MTC_279

3D structure

PDB id

6MTC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGGUAA*UAAAU(E7G)

Length

12 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: E7G

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTC|1|5|C|1732
6MTC|1|5|G|1733
6MTC|1|5|G|1734
6MTC|1|5|U|1735
6MTC|1|5|A|1736
6MTC|1|5|A|1737
*
6MTC|1|5|U|1792
6MTC|1|5|A|1793
6MTC|1|5|A|1794
6MTC|1|5|A|1795
6MTC|1|5|U|1796
6MTC|1|5|E7G|1797

Current chains

Chain 5

28S rRNA

Nearby chains

Chain 7

5S ribosomal RNA; 5S rRNA

Chain D

60S ribosomal protein L5

Chain F

60S ribosomal protein L7

Chain I

60S ribosomal protein L10

Chain T

60S ribosomal protein L21