IL_6MTC_304
3D structure
- PDB id
- 6MTC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GACAGGAUUG*CUCGAUUC
- Length
- 18 nucleotides
- Bulged bases
- 6MTC|1|9|G|1285
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6MTC_304 not in the Motif Atlas
- Homologous match to IL_8P9A_470
- Geometric discrepancy: 0.2768
- The information below is about IL_8P9A_470
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28304.1
- Basepair signature
- cWW-R-L-R-L-R-L-R-L-L-L-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
6MTC|1|9|G|1281
6MTC|1|9|A|1282
6MTC|1|9|C|1283
6MTC|1|9|A|1284
6MTC|1|9|G|1285
6MTC|1|9|G|1286
6MTC|1|9|A|1287
6MTC|1|9|U|1288
6MTC|1|9|U|1289
6MTC|1|9|G|1290
*
6MTC|1|9|C|1309
6MTC|1|9|U|1310
6MTC|1|9|C|1311
6MTC|1|9|G|1312
6MTC|1|9|A|1313
6MTC|1|9|U|1314
6MTC|1|9|U|1315
6MTC|1|9|C|1316
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain KK
- 40S ribosomal protein S10
- Chain MM
- 40S ribosomal protein S12
- Chain dd
- 40S ribosomal protein S29
- Chain ff
- 40S ribosomal protein S27a
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