IL_6MTD_281
3D structure
- PDB id
- 6MTD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with eEF2 and SERBP1 (unrotated state with 40S head swivel)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UUAA(P7G)*CCAUA
- Length
- 10 nucleotides
- Bulged bases
- 6MTD|1|5|U|2070
- QA status
- Modified nucleotides: P7G
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6MTD_281 not in the Motif Atlas
- Homologous match to IL_8C3A_051
- Geometric discrepancy: 0.1336
- The information below is about IL_8C3A_051
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
6MTD|1|5|U|1905
6MTD|1|5|U|1906
6MTD|1|5|A|1907
6MTD|1|5|A|1908
6MTD|1|5|P7G|1909
*
6MTD|1|5|C|2067
6MTD|1|5|C|2068
6MTD|1|5|A|2069
6MTD|1|5|U|2070
6MTD|1|5|A|2071
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain F
- uL30
- Chain Q
- eL18
- Chain e
- eL32
- Chain f
- eL33
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