IL_6MTE_069
3D structure
- PDB id
- 6MTE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- AC(B8H)U*AACU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: B8H
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6MTE_069 not in the Motif Atlas
- Geometric match to IL_255D_001
- Geometric discrepancy: 0.2755
- The information below is about IL_255D_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_13404.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 10
Unit IDs
6MTE|1|5|A|1858
6MTE|1|5|C|1859
6MTE|1|5|B8H|1860
6MTE|1|5|U|1861
*
6MTE|1|5|A|1873
6MTE|1|5|A|1874
6MTE|1|5|C|1875
6MTE|1|5|U|1876
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain F
- uL30
- Chain I
- uL16
- Chain b
- eL29
Coloring options: