IL_6MTE_274
3D structure
- PDB id
- 6MTE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- (OMG)A(A2M)AG*CUAGUAGC
- Length
- 13 nucleotides
- Bulged bases
- 6MTE|1|5|A|1650, 6MTE|1|5|G|1654
- QA status
- Modified nucleotides: OMG, A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6MTE_274 not in the Motif Atlas
- Homologous match to IL_8C3A_030
- Geometric discrepancy: 0.107
- The information below is about IL_8C3A_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_17470.7
- Basepair signature
- cWW-tWW-L-R-tWH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
6MTE|1|5|OMG|1522
6MTE|1|5|A|1523
6MTE|1|5|A2M|1524
6MTE|1|5|A|1525
6MTE|1|5|G|1526
*
6MTE|1|5|C|1648
6MTE|1|5|U|1649
6MTE|1|5|A|1650
6MTE|1|5|G|1651
6MTE|1|5|U|1652
6MTE|1|5|A|1653
6MTE|1|5|G|1654
6MTE|1|5|C|1655
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain C
- uL4
- Chain L
- eL13
- Chain N
- eL15
- Chain a
- uL15
- Chain j
- eL37
Coloring options: