3D structure

PDB id
6MTE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
CGGUAA*UAAAU(E7G)
Length
12 nucleotides
Bulged bases
None detected
QA status
Modified nucleotides: E7G

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6MTE|1|5|C|1732
6MTE|1|5|G|1733
6MTE|1|5|G|1734
6MTE|1|5|U|1735
6MTE|1|5|A|1736
6MTE|1|5|A|1737
*
6MTE|1|5|U|1792
6MTE|1|5|A|1793
6MTE|1|5|A|1794
6MTE|1|5|A|1795
6MTE|1|5|U|1796
6MTE|1|5|E7G|1797

Current chains

Chain 5
28S rRNA

Nearby chains

Chain 7
5S ribosomal RNA; 5S rRNA
Chain D
uL18
Chain F
uL30
Chain I
uL16
Chain S
eL20
Chain T
eL21

Coloring options:

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