IL_6MTE_277
3D structure
- PDB id
- 6MTE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GAUUA*UUCUC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6MTE_277 not in the Motif Atlas
- Homologous match to IL_8C3A_044
- Geometric discrepancy: 0.1219
- The information below is about IL_8C3A_044
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
6MTE|1|5|G|1745
6MTE|1|5|A|1746
6MTE|1|5|U|1747
6MTE|1|5|U|1748
6MTE|1|5|A|1749
*
6MTE|1|5|U|1781
6MTE|1|5|U|1782
6MTE|1|5|C|1783
6MTE|1|5|U|1784
6MTE|1|5|C|1785
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain D
- uL18
- Chain I
- uL16
Coloring options: