IL_6N1D_014
3D structure
- PDB id
- 6N1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric Hybrid State
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- UUC*GA
- Length
- 5 nucleotides
- Bulged bases
- 6N1D|1|A16S|U|368
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6N1D_014 not in the Motif Atlas
- Geometric match to IL_4V88_407
- Geometric discrepancy: 0.1254
- The information below is about IL_4V88_407
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.19
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
6N1D|1|A16S|U|367
6N1D|1|A16S|U|368
6N1D|1|A16S|C|369
*
6N1D|1|A16S|G|392
6N1D|1|A16S|A|393
Current chains
- Chain A16S
- 16S rRNA
Nearby chains
- Chain AS16
- 30S ribosomal protein S16
- Chain BL09
- 50S ribosomal protein L9
Coloring options: