IL_6N1D_053

3D structure

PDB id

6N1D (explore in PDB, NAKB, or RNA 3D Hub)

Description

X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric Hybrid State

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGGAUUG*CAUGAAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6N1D|1|A16S|C|1303
6N1D|1|A16S|G|1304
6N1D|1|A16S|G|1305
6N1D|1|A16S|A|1306
6N1D|1|A16S|U|1307
6N1D|1|A16S|U|1308
6N1D|1|A16S|G|1309
*
6N1D|1|A16S|C|1328
6N1D|1|A16S|A|1329
6N1D|1|A16S|U|1330
6N1D|1|A16S|G|1331
6N1D|1|A16S|A|1332
6N1D|1|A16S|A|1333
6N1D|1|A16S|G|1334

Current chains

Chain A16S

16S rRNA

Nearby chains

Chain AS13

30S ribosomal protein S13

Chain ATHX

30S ribosomal protein Thx