IL_6N1D_086
3D structure
- PDB id
- 6N1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric Hybrid State
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CGC*GGAG
- Length
- 7 nucleotides
- Bulged bases
- 6N1D|1|A23S|G|932
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6N1D_086 not in the Motif Atlas
- Homologous match to IL_7RQB_025
- Geometric discrepancy: 0.2966
- The information below is about IL_7RQB_025
- Detailed Annotation
- Intercalated cWW
- Broad Annotation
- Intercalated cWW
- Motif group
- IL_52767.4
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 28
Unit IDs
6N1D|1|A23S|C|844
6N1D|1|A23S|G|845
6N1D|1|A23S|C|846
*
6N1D|1|A23S|G|931
6N1D|1|A23S|G|932
6N1D|1|A23S|A|933
6N1D|1|A23S|G|934
Current chains
- Chain A23S
- 23S rRNA
Nearby chains
- Chain AL30
- 50S ribosomal protein L30
Coloring options: