IL_6N1D_098
3D structure
- PDB id
- 6N1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric Hybrid State
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GUC*GC
- Length
- 5 nucleotides
- Bulged bases
- 6N1D|1|A23S|U|1012
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6N1D_098 not in the Motif Atlas
- Geometric match to IL_5J7L_279
- Geometric discrepancy: 0.1902
- The information below is about IL_5J7L_279
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 117
Unit IDs
6N1D|1|A23S|G|1011
6N1D|1|A23S|U|1012
6N1D|1|A23S|C|1013
*
6N1D|1|A23S|G|1149
6N1D|1|A23S|C|1150
Current chains
- Chain A23S
- 23S rRNA
Nearby chains
- Chain AL13
- 50S ribosomal protein L13
- Chain AL20
- 50S ribosomal protein L20
Coloring options: