IL_6N1D_121
3D structure
- PDB id
- 6N1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric Hybrid State
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- UAG*CG
- Length
- 5 nucleotides
- Bulged bases
- 6N1D|1|A23S|A|1490
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6N1D_121 not in the Motif Atlas
- Homologous match to IL_7RQB_062
- Geometric discrepancy: 0.4218
- The information below is about IL_7RQB_062
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_37497.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 118
Unit IDs
6N1D|1|A23S|U|1489
6N1D|1|A23S|A|1490
6N1D|1|A23S|G|1491
*
6N1D|1|A23S|C|1499
6N1D|1|A23S|G|1500
Current chains
- Chain A23S
- 23S rRNA
Nearby chains
- Chain AL02
- 50S ribosomal protein L2
Coloring options: