IL_6N1D_188
3D structure
- PDB id
- 6N1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric Hybrid State
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GGAAGAAG*UGUAAAC
- Length
- 15 nucleotides
- Bulged bases
- 6N1D|1|B16S|A|412
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6N1D_188 not in the Motif Atlas
- Homologous match to IL_4LFB_017
- Geometric discrepancy: 0.1372
- The information below is about IL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28026.3
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
6N1D|1|B16S|G|409
6N1D|1|B16S|G|410
6N1D|1|B16S|A|411
6N1D|1|B16S|A|412
6N1D|1|B16S|G|413
6N1D|1|B16S|A|414
6N1D|1|B16S|A|415
6N1D|1|B16S|G|416
*
6N1D|1|B16S|U|427
6N1D|1|B16S|G|428
6N1D|1|B16S|U|429
6N1D|1|B16S|A|430
6N1D|1|B16S|A|431
6N1D|1|B16S|A|432
6N1D|1|B16S|C|433
Current chains
- Chain B16S
- 16S rRNA
Nearby chains
- Chain BS04
- 30S ribosomal protein S4
Coloring options: