IL_6N1D_216

3D structure

PDB id

6N1D (explore in PDB, NAKB, or RNA 3D Hub)

Description

X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric Hybrid State

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GUUG*CACUC

Length

9 nucleotides

Bulged bases

6N1D|1|B16S|U|1125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6N1D|1|B16S|G|1124
6N1D|1|B16S|U|1125
6N1D|1|B16S|U|1126
6N1D|1|B16S|G|1127
*
6N1D|1|B16S|C|1145
6N1D|1|B16S|A|1146
6N1D|1|B16S|C|1147
6N1D|1|B16S|U|1148
6N1D|1|B16S|C|1149

Current chains

Chain B16S

16S rRNA

Nearby chains

Chain BS09

30S ribosomal protein S9

Chain BS10

30S ribosomal protein S10