IL_6N1D_272

3D structure

PDB id

6N1D (explore in PDB, NAKB, or RNA 3D Hub)

Description

X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric Hybrid State

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGAAGACAGC*GUCGAG

Length

16 nucleotides

Bulged bases

6N1D|1|B23S|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6N1D|1|B23S|C|1043
6N1D|1|B23S|G|1044
6N1D|1|B23S|A|1045
6N1D|1|B23S|A|1046
6N1D|1|B23S|G|1047
6N1D|1|B23S|A|1048
6N1D|1|B23S|C|1049
6N1D|1|B23S|A|1050
6N1D|1|B23S|G|1051
6N1D|1|B23S|C|1052
*
6N1D|1|B23S|G|1107
6N1D|1|B23S|U|1108
6N1D|1|B23S|C|1109
6N1D|1|B23S|G|1110
6N1D|1|B23S|A|1111
6N1D|1|B23S|G|1112

Current chains

Chain B23S

23S rRNA

Nearby chains

Chain BL06

50S ribosomal protein L6

Chain BL36

50S ribosomal protein L36