IL_6N7R_001
3D structure
- PDB id
- 6N7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Saccharomyces cerevisiae spliceosomal E complex (ACT1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUUA*UAUG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6N7R_001 not in the Motif Atlas
- Geometric match to IL_1D4R_001
- Geometric discrepancy: 0.1987
- The information below is about IL_1D4R_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 39
Unit IDs
6N7R|1|R|C|4
6N7R|1|R|U|5
6N7R|1|R|U|6
6N7R|1|R|A|7
*
6N7R|1|r|U|2
6N7R|1|r|A|3
6N7R|1|r|U|4
6N7R|1|r|G|5
Current chains
- Chain R
- U1 snRNA
- Chain r
- ACT1 pre-mRNA
Nearby chains
- Chain B
- U1 small nuclear ribonucleoprotein C
- Chain I
- Protein LUC7
- Chain N
- Small nuclear ribonucleoprotein Sm D3
Coloring options: