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Motif IL_15225.3 Version IL_15225.3 of this group appears in releases 4.7 to 4.7

#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name for chain 1 2 3 4break 5 6 7 81-82-73-64-5
1 IL_6GYV_0026GYV0.25180ALariat-capping ribozymeG31G32G33U34*A15G16A17C18cWWcWWcWW
2 IL_8P9A_4218P9A0.29460Tandem non-canonical cWW pairssR SSU rRNAG885U886A887U888*A924G925A926C927cWWcWWcWW
3 IL_8CRE_4358CRE0.28990Tandem non-canonical cWW pairsCM SSU rRNAG870U871A872U873*A909G910A911C912cWWcWWcWW
4 IL_8GLP_2398GLP0.28160Tandem non-canonical cWW pairs (H)S2 SSU rRNAG942U943A944U945*A981G982A983C984cWWcWWcWW
5 IL_9H3G_2019H3G0.34270h1 SSU rRNAG886U887A888U889*A925G926A927C928cWWcWWcWW
6 IL_3CJZ_0013CJZ0.33470Tandem non-canonical cWW pairsA+BRNA (13-mer)G5M2G6A7C8*G18M2G19A20C21cWWcWWcWWcWW
7 IL_5LQO_0025LQO0.25990Tandem non-canonical cWW pairsB+ARNA (10-mer)G4G5A6C7*G4G5A6C7cWWcWWcWWcWW
8 IL_5LQT_0025LQT0.18760Tandem non-canonical cWW pairsB+ARNA (10-mer)G4G56MZ6C7*G4G56MZ6C7cWWcWWcWWcWW
9 IL_8GLP_2378GLP0.26630S2 SSU rRNAG928G929C930C931*G1010A1011A1012U1013ncWWcWWcWW
10 IL_8CRE_4338CRE0.27410Tandem non-canonical cWW pairsCM SSU rRNAG856G857U858C859*G938G939A940C941cWWcWWcWW
11 IL_8P9A_4198P9A0.28200Tandem non-canonical cWW pairssR SSU rRNAG871G872U873C874*G953G954A955C956cWWcWWcWW
12 IL_9H3G_1999H3G0.29260h1 SSU rRNAA872G873U874C875*G954G955A956U957cWWcWWcWW
13 IL_4K27_0014K270.34190Tandem non-canonical cWW pairsUMyotonic Dystrophy Type 2 RNAC49C50U51G52*C4C5U6G7cWWcWWcWWcWW
14 IL_8GLP_3108GLP0.33740Tandem non-canonical cWW pairs (H)L5 LSU rRNAU4295PSU4296G4297A4298*PSU4312A4313C4314A4315cWWcWWcWWcWW
15 IL_6JDV_0026JDV0.37580Tandem non-canonical cWW pairsBCRISPR RNA direct repeat elementC35C36U37U38*A63C64C65G66cWWcWWcWW
16 IL_3WBM_0033WBM0.30820Tandem non-canonical cWW pairsY+XRNA (25-MER)A10C11C12C13*G14A15C16U17cWWncWBcWWcWW
17 IL_1D4R_0011D4R0.32020Tandem non-canonical cWW pairsB+A29-MER OF MODIFIED SRP RNA HELIX 6G22A23C24C25*G4A5C6C7cWWcWWacWWcWW
18 IL_1JID_0021JID0.35780Tandem non-canonical cWW pairsBHELIX 6 OF HUMAN SRP RNAG156A157C158C159*G138A139C140C141cWWcWWcWWcWW
19 IL_1D4R_0031D4R0.32790Tandem non-canonical cWW pairsB+A29-MER OF MODIFIED SRP RNA HELIX 6G4A5C6C7*G22A23C24C25cWWcWWcWWcWW
20 IL_1MFQ_0041MFQ0.30730Tandem non-canonical cWW pairsA SRP RNAG138A139C140C141*G156A157C158C159cWWncWWncWWcWW
21 IL_9AXU_0949AXU0.23540Tandem non-canonical cWW pairs (H)2 LSU rRNAU2813U2814G2815A2816*U2830A2831C2832A2833cWWcWWcWWcWW
22 IL_7R9G_0027R9G0.20290Tandem non-canonical cWW pairsBRNA (18-mer)C5G6G7G8*C5||||2_555G6||||2_555G7||||2_555G8||||2_555ncWWncWW
23 IL_8OI5_1018OI50.13010Tandem non-canonical cWW pairs (H)1 LSU rRNAU2690U2691G2692A2693*U2707A2708C2709A2710cWWcWWcWW
24 IL_8P9A_3278P9A0.11150Tandem non-canonical cWW pairsAR LSU rRNAU2718U2719G2720A2721*U2735A2736C2737A2738cWWcWWcWW
25 IL_9H3G_1149H3G0.00000A LSU rRNAC2717U2718G2719A2720*OMU2734A2735C2736G2737cWWcWWcWW
26 IL_8B0X_1038B0X0.12030Tandem non-canonical cWW pairs (H)a LSU rRNAC1116G1117G1118C1119*G1040A1041A1042G1043cWWcWWcWWcWW
27 IL_9H3G_2069H3G0.24240h1 SSU rRNAG1042G1043A1044U1045*G1075C1076A1077C1078cWWcWWncWBcWW
28 IL_8P9A_4268P9A0.28550Tandem non-canonical cWW pairssR SSU rRNAG1041G1042A1043U1044*G1074C1075A1076C1077cWWcWWncWBcWW
29 IL_8CRE_4408CRE0.25410Tandem non-canonical cWW pairsCM SSU rRNAG1026G1027A1028U1029*G1059C1060A1061C1062cWWcWWncWBcWW
30 IL_8GLP_2448GLP0.27210S2 SSU rRNAC1098G1099A1100U1101*G1131C1132A1133G1134cWWcWWncWBcWW
31 IL_8GLP_1668GLP0.26010L5 LSU rRNAG4743A4744G4745C4746*G4954A4955A4956C4957cWWcWwcWWcWW
32 IL_8CRE_4348CRE0.31101Tandem non-canonical cWW pairsCM SSU rRNAC935A936A937G938*C859G860G862G863cWWcWWcWWcWW
33 IL_8P9A_4208P9A0.32761Tandem non-canonical cWW pairssR SSU rRNAC950A951A952G953*C874G875G877G878cWWcWWcWWcWW
34 IL_9H3G_2009H3G0.29241h1 SSU rRNAC951A952A953G954*C875G876G878G879cWWcWWcWWcWW
35 IL_8GLP_2388GLP0.27081Tandem non-canonical cWW pairs (H)S2 SSU rRNAC1007A1008A1009G1010*C931G932G934G935cWWcWWcWWcWW
36 IL_8B0X_0328B0X0.31771Tandem non-canonical cWW pairs (H)A SSU rRNAU662A663G664G666*U740G741G742A743cWWcWWcwWcWW
37 IL_4LFB_0294LFB0.32721Tandem non-canonical cWW pairsA SSU rRNAG662A663G664G666*U740G741G742U743cWWcWWcwWcWW
38 IL_1KUQ_0031KUQ0.52021Tandem non-canonical cWW pairsB16S RIBOSOMAL RNA FRAGMENTG26A27||AG28||AG30*U39G40G41U42cWWncWWcwWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GUAU*AGAC4
GACC*GACC4
CAAG*CGGGG4
UUGA*UACA3
GGAU*GCAC3
GGUC*GGAC2
GAGAG*UGGU2
GGGU*AGAC1
GAC*GAC1
GGAC*GGAC1
GG(6MZ)C*GG(6MZ)C1
GGCC*GAAU1
AGUC*GGAU1
CCUG*CCUG1
U(PSU)GA*(PSU)ACA1
CCUU*ACCG1
ACCC*GACU1
CGGG*CGGG1
CUGA*(OMU)ACG1
CGGC*GAAG1
CGAU*GCAG1
GAGC*GAAC1
UAGAG*UGGA1
Non-Watson-Crick part of the motif
SequenceCounts
UA*GA4
AC*AC4
UG*AC4
GA*CA4
AA*GGG4
GU*GA3
AGA*GG3
GG*GA1
(M2G)A*(M2G)A1
GA*GA1
G(6MZ)*G(6MZ)1
GC*AA1
CU*CU1
(PSU)G*AC1
CU*CC1
CC*AC1
GG*GG1
GG*AA1
AG*AA1

Release history

Release4.7
Date2026-02-25
StatusUpdated, 1 parent

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Tandem non-canonical cWW pairs (22)
  • (9)
  • Tandem non-canonical cWW pairs (H) (7)
    • Basepair signature
    cWW-cWW-cWW-cWW
    Heat map statistics
    Min 0.05 | Avg 0.35 | Max 0.73
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