IL_6N9F_061
3D structure
- PDB id
- 6N9F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic ACCA-DPhe and bound to mRNA and P-site tRNA at 3.7A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- GGAAG*UGACAAC
- Length
- 12 nucleotides
- Bulged bases
- 6N9F|1|1A|C|1590
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6N9F_061 not in the Motif Atlas
- Homologous match to IL_7RQB_063
- Geometric discrepancy: 0.1109
- The information below is about IL_7RQB_063
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_02656.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6N9F|1|1A|G|1572
6N9F|1|1A|G|1573
6N9F|1|1A|A|1574
6N9F|1|1A|A|1575
6N9F|1|1A|G|1576
*
6N9F|1|1A|U|1587
6N9F|1|1A|G|1588
6N9F|1|1A|A|1589
6N9F|1|1A|C|1590
6N9F|1|1A|A|1591
6N9F|1|1A|A|1592
6N9F|1|1A|C|1593
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: