IL_6N9F_065
3D structure
- PDB id
- 6N9F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic ACCA-DPhe and bound to mRNA and P-site tRNA at 3.7A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- ACUCUG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 6N9F|1|1A|G|2014
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6N9F_065 not in the Motif Atlas
- Geometric match to IL_7A0S_062
- Geometric discrepancy: 0.1002
- The information below is about IL_7A0S_062
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_76758.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 7
Unit IDs
6N9F|1|1A|A|1716
6N9F|1|1A|C|1717
6N9F|1|1A|U|1718
6N9F|1|1A|C|1719
6N9F|1|1A|U|1720
6N9F|1|1A|G|1721
*
6N9F|1|1A|C|2012
6N9F|1|1A|U|2013
6N9F|1|1A|G|2014
6N9F|1|1A|U|2015
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1E
- 50S Ribosomal Protein L3
- Chain 1O
- 50S Ribosomal Protein L14
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