IL_6NDK_334
3D structure
- PDB id
- 6NDK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ASLSufA6 A37.5 bound to the 70S A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.64 Å
Loop
- Sequence
- UUUCC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- 6NDK|1|YA|U|2689, 6NDK|1|YA|C|2690
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6NDK_334 not in the Motif Atlas
- Homologous match to IL_7RQB_105
- Geometric discrepancy: 0.1067
- The information below is about IL_7RQB_105
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_08296.3
- Basepair signature
- cWW-L-tHS-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
6NDK|1|YA|U|2687
6NDK|1|YA|U|2688
6NDK|1|YA|U|2689
6NDK|1|YA|C|2690
6NDK|1|YA|C|2691
*
6NDK|1|YA|G|2718
6NDK|1|YA|G|2719
6NDK|1|YA|U|2720
6NDK|1|YA|A|2721
6NDK|1|YA|G|2722
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain YE
- 50S ribosomal protein L3
- Chain YR
- 50S ribosomal protein L17
- Chain YT
- 50S ribosomal protein L19
Coloring options: