IL_6NQB_022
3D structure
- PDB id
- 6NQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGGCUAAC*GG
- Length
- 10 nucleotides
- Bulged bases
- 6NQB|1|A|A|510
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6NQB_022 not in the Motif Atlas
- Homologous match to IL_4LFB_020
- Geometric discrepancy: 0.1723
- The information below is about IL_4LFB_020
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_41203.4
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 11
Unit IDs
6NQB|1|A|C|504
6NQB|1|A|G|505
6NQB|1|A|G|506
6NQB|1|A|C|507
6NQB|1|A|U|508
6NQB|1|A|A|509
6NQB|1|A|A|510
6NQB|1|A|C|511
*
6NQB|1|A|G|540
6NQB|1|A|G|541
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain D
- 30S ribosomal protein S4
- Chain L
- 30S ribosomal protein S12
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