IL_6NQB_040
3D structure
- PDB id
- 6NQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CAGCG*CGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6NQB_040 not in the Motif Atlas
- Geometric match to IL_4LFB_066
- Geometric discrepancy: 0.3728
- The information below is about IL_4LFB_066
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_66997.1
- Basepair signature
- cWW-cWS-L-R-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
6NQB|1|A|C|1129
6NQB|1|A|A|1130
6NQB|1|A|G|1131
6NQB|1|A|C|1132
6NQB|1|A|G|1133
*
6NQB|1|A|C|1141
6NQB|1|A|G|1142
6NQB|1|A|G|1143
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
No other chains within 10ÅColoring options: