IL_6NSH_112

3D structure

PDB id

6NSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified ASL proline bound to Thermus thermophilus 70S (near-cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

UAG*CAGG

Length

7 nucleotides

Bulged bases

6NSH|1|RA|G|1559

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NSH_112 not in the Motif Atlas

Homologous match to IL_7A0S_052

Geometric discrepancy: 0.226

The information below is about IL_7A0S_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38565.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

12

Unit IDs

6NSH|1|RA|U|1433
6NSH|1|RA|A|1434
6NSH|1|RA|G|1435
*
6NSH|1|RA|C|1557
6NSH|1|RA|A|1558
6NSH|1|RA|G|1559
6NSH|1|RA|G|1560

Current chains

Chain RA

23S rRNA

Nearby chains