IL_6NSH_208
3D structure
- PDB id
- 6NSH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Modified ASL proline bound to Thermus thermophilus 70S (near-cognate)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GCA*UUCCC
- Length
- 8 nucleotides
- Bulged bases
- 6NSH|1|XA|C|934
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6NSH_208 not in the Motif Atlas
- Homologous match to IL_4LFB_037
- Geometric discrepancy: 0.1203
- The information below is about IL_4LFB_037
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_61370.1
- Basepair signature
- cWW-cWS-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
6NSH|1|XA|G|933
6NSH|1|XA|C|934
6NSH|1|XA|A|935
*
6NSH|1|XA|U|1380
6NSH|1|XA|U|1381
6NSH|1|XA|C|1382
6NSH|1|XA|C|1383
6NSH|1|XA|C|1384
Current chains
- Chain XA
- 16S rRNA
Nearby chains
- Chain XG
- 30S ribosomal protein S7
- Chain XI
- 30S ribosomal protein S9
- Chain XV
- P-site ASLPro
- Chain XX
- mRNA
Coloring options: