IL_6NTA_111

3D structure

PDB id

6NTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified ASL proline bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGAUG*CUAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NTA_111 not in the Motif Atlas

Homologous match to IL_7RQB_055

Geometric discrepancy: 0.1401

The information below is about IL_7RQB_055

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_89002.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

20

Unit IDs

6NTA|1|RA|C|1417
6NTA|1|RA|G|1418
6NTA|1|RA|A|1419
6NTA|1|RA|U|1420
6NTA|1|RA|G|1421
*
6NTA|1|RA|C|1577
6NTA|1|RA|U|1578
6NTA|1|RA|A|1579
6NTA|1|RA|A|1580
6NTA|1|RA|G|1581

Current chains

Chain RA

23S rRNA

Nearby chains