3D structure

PDB id
6NU2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structural insights into unique features of the human mitochondrial ribosome recycling
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
AUAAGUAA*UGAAAUU
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6NU2_021 not in the Motif Atlas
Homologous match to IL_5J7L_289
Geometric discrepancy: 0.2064
The information below is about IL_5J7L_289
Detailed Annotation
8x7 Sarcin-Ricin; G-bulge
Broad Annotation
Sarcin-Ricin; G-bulge
Motif group
IL_04346.10
Basepair signature
cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
Number of instances in this motif group
15

Unit IDs

6NU2|1|A|A|2306
6NU2|1|A|U|2307
6NU2|1|A|A|2308
6NU2|1|A|A|2309
6NU2|1|A|G|2310
6NU2|1|A|U|2311
6NU2|1|A|A|2312
6NU2|1|A|A|2313
*
6NU2|1|A|U|2674
6NU2|1|A|G|2675
6NU2|1|A|A|2676
6NU2|1|A|A|2677
6NU2|1|A|A|2678
6NU2|1|A|U|2679
6NU2|1|A|U|2680

Current chains

Chain A
16S rRNA

Nearby chains

Chain 0
39S ribosomal protein L32, mitochondrial
Chain F
39S ribosomal protein L4, mitochondrial
Chain R
39S ribosomal protein L20, mitochondrial
Chain T
39S ribosomal protein L22, mitochondrial

Coloring options:


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