IL_6NU2_041

3D structure

PDB id

6NU2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into unique features of the human mitochondrial ribosome recycling

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GC*GAC

Length

5 nucleotides

Bulged bases

6NU2|1|A|A|2984

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NU2_041 not in the Motif Atlas

Geometric match to IL_4V9F_101

Geometric discrepancy: 0.2052

The information below is about IL_4V9F_101

Detailed Annotation

Major groove intercalation

Broad Annotation

Major groove intercalation

Motif group

IL_14190.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

160

Unit IDs

6NU2|1|A|G|2941
6NU2|1|A|C|2942
*
6NU2|1|A|G|2983
6NU2|1|A|A|2984
6NU2|1|A|C|2985

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

39S ribosomal protein L16, mitochondrial

Chain o

Ribosomal protein 63, mitochondrial