IL_6NU2_063

3D structure

PDB id

6NU2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into unique features of the human mitochondrial ribosome recycling

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGGUCAAUUU*AUUA

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NU2_063 not in the Motif Atlas

Geometric match to IL_5EW4_001

Geometric discrepancy: 0.2998

The information below is about IL_5EW4_001

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_76776.2

Basepair signature

cWW-cWW-L-R-cWW

Number of instances in this motif group

5

Unit IDs

6NU2|1|AA|U|876
6NU2|1|AA|G|877
6NU2|1|AA|G|878
6NU2|1|AA|U|879
6NU2|1|AA|C|880
6NU2|1|AA|A|881
6NU2|1|AA|A|882
6NU2|1|AA|U|883
6NU2|1|AA|U|884
6NU2|1|AA|U|885
*
6NU2|1|AA|A|910
6NU2|1|AA|U|911
6NU2|1|AA|U|912
6NU2|1|AA|A|913

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AD

28S ribosomal protein S5, mitochondrial

Chain AJ

28S ribosomal protein S12, mitochondrial

Chain AO

28S ribosomal protein S18b, mitochondrial