3D structure

PDB id
6NU2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structural insights into unique features of the human mitochondrial ribosome recycling
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
CAAA*UAAG
Length
8 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6NU2_084 not in the Motif Atlas
Geometric match to IL_5J7L_256
Geometric discrepancy: 0.2485
The information below is about IL_5J7L_256
Detailed Annotation
Double sheared
Broad Annotation
Double sheared
Motif group
IL_09705.15
Basepair signature
cWW-tSH-tHS-cWW
Number of instances in this motif group
34

Unit IDs

6NU2|1|AA|C|1274
6NU2|1|AA|A|1275
6NU2|1|AA|A|1276
6NU2|1|AA|A|1277
*
6NU2|1|AA|U|1298
6NU2|1|AA|A|1299
6NU2|1|AA|A|1300
6NU2|1|AA|G|1301

Current chains

Chain AA
12S rRNA

Nearby chains

Chain A1
28S ribosomal protein S35, mitochondrial
Chain AB
28S ribosomal protein S2, mitochondrial
Chain AC
28S ribosomal protein S24, mitochondrial
Chain AD
28S ribosomal protein S5, mitochondrial
Chain AG
28S ribosomal protein S9, mitochondrial

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.4388 s