IL_6NU3_049

3D structure

PDB id

6NU3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into unique features of the human mitochondrial ribosome recycling

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

UAG*CA

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NU3_049 not in the Motif Atlas

Geometric match to IL_4V88_388

Geometric discrepancy: 0.1969

The information below is about IL_4V88_388

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_18604.1

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

46

Unit IDs

6NU3|1|A|U|2955
6NU3|1|A|A|2956
6NU3|1|A|G|2957
*
6NU3|1|A|C|2967
6NU3|1|A|A|2968

Current chains

Chain A

16S rRNA

Nearby chains

Chain 4

39S ribosomal protein L36, mitochondrial

Chain N

39S ribosomal protein L16, mitochondrial

Chain l

39S ribosomal protein L54, mitochondrial