IL_6NU3_080

3D structure

PDB id

6NU3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into unique features of the human mitochondrial ribosome recycling

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

AAC*GCU

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NU3_080 not in the Motif Atlas

Geometric match to IL_7A0S_026

Geometric discrepancy: 0.2528

The information below is about IL_7A0S_026

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

213

Unit IDs

6NU3|1|AA|A|1109
6NU3|1|AA|A|1110
6NU3|1|AA|C|1111
*
6NU3|1|AA|G|1130
6NU3|1|AA|C|1131
6NU3|1|AA|U|1132

Current chains

Chain AA

12S rRNA

Nearby chains

Chain A2

Coiled-coil-helix-coiled-coil-helix domain-containing protein 1

Chain AD

28S ribosomal protein S5, mitochondrial

Chain AJ

28S ribosomal protein S12, mitochondrial

Chain AN

28S ribosomal protein S17, mitochondrial

Chain AT

28S ribosomal protein S25, mitochondrial