IL_6NUO_022

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGUAAAG*CG

Length

9 nucleotides

Bulged bases

6NUO|1|QA|A|572

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NUO_022 not in the Motif Atlas

Homologous match to IL_5J7L_026

Geometric discrepancy: 0.0956

The information below is about IL_5J7L_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38186.6

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

4

Unit IDs

6NUO|1|QA|C|569
6NUO|1|QA|G|570
6NUO|1|QA|U|571
6NUO|1|QA|A|572
6NUO|1|QA|A|573
6NUO|1|QA|A|574
6NUO|1|QA|G|575
*
6NUO|1|QA|C|880
6NUO|1|QA|G|881

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QL

30S ribosomal protein S12

Chain QQ

30S ribosomal protein S17