IL_6NUO_054

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CAC*GAAG

Length

7 nucleotides

Bulged bases

6NUO|1|QA|A|1493

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NUO_054 not in the Motif Atlas

Geometric match to IL_8UO6_002

Geometric discrepancy: 0.2775

The information below is about IL_8UO6_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31737.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

12

Unit IDs

6NUO|1|QA|C|1407
6NUO|1|QA|A|1408
6NUO|1|QA|C|1409
*
6NUO|1|QA|G|1491
6NUO|1|QA|A|1492
6NUO|1|QA|A|1493
6NUO|1|QA|G|1494

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QL

30S ribosomal protein S12

Chain QX

mRNA

Chain RA

Large subunit ribosomal RNA; LSU rRNA