IL_6NUO_084

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGC*GGAG

Length

7 nucleotides

Bulged bases

6NUO|1|RA|G|977

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NUO_084 not in the Motif Atlas

Geometric match to IL_7RQB_025

Geometric discrepancy: 0.3087

The information below is about IL_7RQB_025

Detailed Annotation

Intercalated cWW

Broad Annotation

Intercalated cWW

Motif group

IL_52767.4

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

28

Unit IDs

6NUO|1|RA|C|891
6NUO|1|RA|G|892
6NUO|1|RA|C|893
*
6NUO|1|RA|G|976
6NUO|1|RA|G|977
6NUO|1|RA|A|978
6NUO|1|RA|G|979

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R3

50S ribosomal protein L30