IL_6NUO_104

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGAUG*UAAG

Length

9 nucleotides

Bulged bases

6NUO|1|RA|U|1250

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NUO_104 not in the Motif Atlas

Homologous match to IL_7RQB_046

Geometric discrepancy: 0.2521

The information below is about IL_7RQB_046

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68574.2

Basepair signature

cWW-tHH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

6NUO|1|RA|C|1247
6NUO|1|RA|G|1248
6NUO|1|RA|A|1249
6NUO|1|RA|U|1250
6NUO|1|RA|G|1251
*
6NUO|1|RA|U|1286
6NUO|1|RA|A|1287
6NUO|1|RA|A|1288
6NUO|1|RA|G|1289

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RF

50S ribosomal protein L4

Chain RP

50S ribosomal protein L15