IL_6NUO_134

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GC*GCAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NUO_134 not in the Motif Atlas

Geometric match to IL_7RQB_076

Geometric discrepancy: 0.1097

The information below is about IL_7RQB_076

Detailed Annotation

Bulged stacked bases

Broad Annotation

Bulged stacked bases

Motif group

IL_59677.2

Basepair signature

cWW-cWW

Number of instances in this motif group

19

Unit IDs

6NUO|1|RA|G|1955
6NUO|1|RA|C|1956
*
6NUO|1|RA|G|1986
6NUO|1|RA|C|1987
6NUO|1|RA|A|1988
6NUO|1|RA|C|1989

Current chains

Chain RA

23S rRNA

Nearby chains

Chain QV

Transfer RNA; tRNA