IL_6NUO_237
3D structure
- PDB id
- 6NUO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6NUO_237 not in the Motif Atlas
- Homologous match to IL_7RQB_001
- Geometric discrepancy: 0.0822
- The information below is about IL_7RQB_001
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_66414.6
- Basepair signature
- cWW-L-R-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
6NUO|1|YA|G|24
6NUO|1|YA|U|25
6NUO|1|YA|G|26
6NUO|1|YA|G|27
6NUO|1|YA|A|28
6NUO|1|YA|U|29
6NUO|1|YA|G|30
*
6NUO|1|YA|C|535
6NUO|1|YA|U|536
6NUO|1|YA|G|537
6NUO|1|YA|A|538
6NUO|1|YA|A|539
6NUO|1|YA|A|540
6NUO|1|YA|C|541
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y5
- 50S ribosomal protein L32
- Chain YU
- 50S ribosomal protein L20
- Chain YW
- 50S ribosomal protein L22
Coloring options: